• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF5628 from Variovorax sp. SCN45

    Transcriptional regulator Daci_1847, LysR family
    SEED: Hydrogen peroxide-inducible genes activator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF166 Permease of the drug/metabolite transporter (DMT) superfamily no 0.61
    2 GFF4737 Nitrate ABC transporter, substrate-binding protein no 0.61
    3 GFF4899 Transcriptional regulator, Crp/Fnr family no 0.59
    4 GFF3150 Transcriptional regulator, AsnC family no 0.57
    5 GFF3874 Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7) no 0.56
    6 GFF7353 1,2-phenylacetyl-CoA epoxidase, subunit C (EC 1.14.13.149) no 0.56
    7 GFF837 FIG01002808: hypothetical protein no 0.56
    8 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) no 0.55
    9 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) 0.17 0.54
    10 GFF3726 RND efflux system, membrane fusion protein no 0.54
    11 GFF1312 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.54
    12 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.54
    13 GFF5080 DNA recombination-dependent growth factor RdgC no 0.53
    14 GFF295 Ribonuclease G no 0.52
    15 GFF6297 Putative transmembrane protein no 0.52
    16 GFF878 COGs COG2343 no 0.52
    17 GFF2045 Peptide chain release factor 3 no 0.52
    18 GFF5047 hypothetical protein no 0.51
    19 GFF5554 FIG00347521: hypothetical protein no 0.51
    20 GFF401 PhbF no 0.51

    Or look for negative cofitness