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  • Top cofit genes for GFF5626 from Variovorax sp. SCN45

    Patatin
    SEED: Patatin

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) 0.70 0.63
    2 GFF959 Phage holin no 0.60
    3 GFF3647 Cytochrome b no 0.59
    4 GFF6158 carbon monoxide dehydrogenase E protein no 0.58
    5 GFF3921 Tryptophan 2,3-dioxygenase (EC 1.13.11.11) no 0.56
    6 GFF7075 no description no 0.56
    7 GFF3956 no description no 0.56
    8 GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) 0.42 0.55
    9 GFF2631 Transcriptional regulator, ArsR family no 0.53
    10 GFF6214 Amidinotransferase family protein no 0.53
    11 GFF2113 NADH dehydrogenase (EC 1.6.99.3) no 0.53
    12 GFF6222 T6SS component TssM (IcmF/VasK) no 0.52
    13 GFF6686 Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins no 0.52
    14 GFF3967 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.50
    15 GFF1847 Nucleoside ABC transporter, substrate-binding protein no 0.50
    16 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.49
    17 GFF4895 FIG074102: hypothetical protein no 0.49
    18 GFF4741 Small heat shock protein no 0.49
    19 GFF6712 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    20 GFF7268 BUG/TctC family periplasmic protein no 0.48

    Or look for negative cofitness