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Cofit
Protein
Homologs
Top cofit genes for GFF5626 from
Variovorax sp. SCN45
Patatin
SEED: Patatin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3249
Guanyl-specific ribonuclease (EC 3.1.27.3)
0.70
0.63
2
GFF959
Phage holin
no
0.60
3
GFF3647
Cytochrome b
no
0.59
4
GFF6158
carbon monoxide dehydrogenase E protein
no
0.58
5
GFF3921
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
no
0.56
6
GFF7075
no description
no
0.56
7
GFF3956
no description
no
0.56
8
GFF6256
Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37)
0.42
0.55
9
GFF2631
Transcriptional regulator, ArsR family
no
0.53
10
GFF6214
Amidinotransferase family protein
no
0.53
11
GFF2113
NADH dehydrogenase (EC 1.6.99.3)
no
0.53
12
GFF6222
T6SS component TssM (IcmF/VasK)
no
0.52
13
GFF6686
Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins
no
0.52
14
GFF3967
Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8)
no
0.50
15
GFF1847
Nucleoside ABC transporter, substrate-binding protein
no
0.50
16
GFF1755
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.49
17
GFF4895
FIG074102: hypothetical protein
no
0.49
18
GFF4741
Small heat shock protein
no
0.49
19
GFF6712
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.49
20
GFF7268
BUG/TctC family periplasmic protein
no
0.48
Or look for
negative cofitness