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  • Top cofit genes for GFF5607 from Variovorax sp. SCN45

    Sigma-54 activated regulatory protein
    SEED: Sigma-54 activated regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4665 no description no 0.56
    2 GFF5581 SSU ribosomal protein S5p (S2e) no 0.54
    3 GFF5786 Transcriptional regulator, LuxR family no 0.52
    4 GFF5980 Cyanate hydratase (EC 4.2.1.104) no 0.52
    5 GFF6830 penicillin amidase family protein no 0.51
    6 GFF3771 no description no 0.49
    7 GFF676 Aminoglycoside 9-phosphotransferase (EC 2.7.1.-) => APH(9)-I no 0.48
    8 GFF3438 Amidohydrolase family protein no 0.47
    9 GFF7048 hypothetical protein no 0.47
    10 GFF6839 hypothetical protein no 0.47
    11 GFF2433 Putative OMR family iron-siderophore receptor precursor no 0.47
    12 GFF5066 Exodeoxyribonuclease III (EC 3.1.11.2) no 0.46
    13 GFF3009 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.46
    14 GFF100 no description no 0.45
    15 GFF2385 no description no 0.45
    16 GFF3353 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.45
    17 GFF723 RNA polymerase ECF-type sigma factor no 0.45
    18 GFF2587 hypothetical protein no 0.45
    19 GFF7085 BUG/TctC family periplasmic protein no 0.44
    20 GFF1793 hypothetical protein no 0.44

    Or look for negative cofitness