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  • Top cofit genes for GFF5601 from Variovorax sp. SCN45

    Predicted hydrolase of the alpha/beta-hydrolase fold
    SEED: Predicted hydrolase of the alpha/beta-hydrolase fold

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4127 Dibenzothiophene desulfurization enzyme B no 0.67
    2 GFF3432 L-carnitine dehydratase/bile acid-inducible protein F no 0.65
    3 GFF1923 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.60
    4 GFF3817 RNA polymerase sigma factor no 0.58
    5 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.55
    6 GFF5808 Putative oxidoreductase no 0.54
    7 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE no 0.54
    8 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.53
    9 GFF882 Outer membrane porin no 0.51
    10 GFF7044 Inner membrane protein YedI no 0.50
    11 GFF5987 Response regulator BaeR no 0.50
    12 GFF5653 Acyl-CoA dehydrogenase (EC 1.3.8.1), Mycobacterial subgroup FadE16 no 0.50
    13 GFF4589 no description no 0.49
    14 GFF3575 no description no 0.49
    15 GFF5210 hypothetical protein no 0.49
    16 GFF4571 Acyl-CoA dehydrogenase family protein no 0.48
    17 GFF4457 Monofunctional biosynthetic peptidoglycan transglycosylase 0.19 0.48
    18 GFF1859 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.18 0.48
    19 GFF88 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.47
    20 GFF5996 BUG/TctC family periplasmic protein no 0.47

    Or look for negative cofitness