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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF56 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2119
Type IV fimbrial biogenesis protein PilW
no
0.55
2
GFF6319
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.53
3
GFF3557
hypothetical protein
no
0.50
4
GFF436
LrgA-associated membrane protein LrgB
no
0.50
5
GFF3009
NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
no
0.49
6
GFF336
no description
no
0.48
7
GFF6926
MBL-fold metallo-hydrolase superfamily
no
0.48
8
GFF3793
no description
no
0.47
9
GFF3472
Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)
no
0.47
10
GFF594
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.46
11
GFF4936
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.46
12
GFF1573
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.46
13
GFF7113
hypothetical protein
no
0.45
14
GFF5669
hypothetical protein
no
0.44
15
GFF4998
L-carnitine dehydratase/bile acid-inducible protein F
no
0.44
16
GFF7150
Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1)
no
0.44
17
GFF63
Putative glycosyltransferase
no
0.44
18
GFF5662
no description
no
0.44
19
GFF3792
no description
no
0.44
20
GFF2404
Hypothetical protein with Rieske (2Fe-2S) region
no
0.44
Or look for
negative cofitness