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  • Top cofit genes for GFF5585 from Variovorax sp. SCN45

    Transcriptional regulator, MarR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2050 hypothetical protein no 0.62
    2 GFF1094 Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1) no 0.57
    3 GFF2261 Adenylate cyclase (EC 4.6.1.1) no 0.55
    4 GFF2559 hypothetical protein no 0.53
    5 GFF6455 Bll3817 protein no 0.53
    6 GFF5105 Transcriptional regulator, MerR family no 0.53
    7 GFF1822 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.52
    8 GFF6939 ABC-type antimicrobial peptide transport system, permease component no 0.52
    9 GFF7200 Alkanesulfonates transport system permease protein no 0.52
    10 GFF1926 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.51
    11 GFF7327 FIG074102: hypothetical protein no 0.50
    12 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.50
    13 GFF1837 Transcriptional regulator, LysR family no 0.50
    14 GFF5602 FIG00348944: hypothetical protein no 0.49
    15 GFF2078 hypothetical protein no 0.48
    16 GFF2187 ATPase associated with various cellular activities, AAA_5 no 0.48
    17 GFF1596 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.48
    18 GFF4866 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.48
    19 GFF1465 ABC transporter spermidine/putrescine-binding protein no 0.48
    20 GFF274 Probable RNA methyltransferase PA1839 no 0.48

    Or look for negative cofitness