• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF5582 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3828 hypothetical protein no 0.63
    2 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly 0.29 0.63
    3 GFF4698 Transcriptional regulator of various polyols utilization, AraC family no 0.62
    4 GFF7299 MotA/TolQ/ExbB proton channel family protein no 0.62
    5 GFF4059 hypothetical protein no 0.61
    6 GFF131 L-glyceraldehyde 3-phosphate reductase no 0.60
    7 GFF747 Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) no 0.57
    8 GFF4154 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) 0.28 0.57
    9 GFF1910 no description no 0.56
    10 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.55
    11 GFF452 Chloride channel protein no 0.55
    12 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.55
    13 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.54
    14 GFF5248 Outer membrane porin protein 32 precursor no 0.53
    15 GFF4981 Cysteine desulfurase (EC 2.8.1.7) no 0.53
    16 GFF5870 hypothetical protein no 0.52
    17 GFF5185 FIG00732904: hypothetical protein no 0.52
    18 GFF5903 Iron-sulfur cluster regulator IscR no 0.52
    19 GFF4664 hypothetical protein no 0.52
    20 GFF66 hypothetical protein no 0.52

    Or look for negative cofitness