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  • Top cofit genes for PS417_28525 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: FIG006045: Sigma factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_10750 hypothetical protein no 0.24
    2 PS417_21220 acetyl-CoA acetyltransferase no 0.23
    3 PS417_17045 hypothetical protein no 0.22
    4 PS417_25775 lipoprotein no 0.22
    5 PS417_09700 transaldolase no 0.21
    6 PS417_11995 RNA polymerase sigma factor no 0.21
    7 PS417_16235 ABC transporter ATP-binding protein 0.64 0.21
    8 PS417_28535 TonB-dependent receptor 0.18 0.21
    9 PS417_28405 hypothetical protein no 0.20
    10 PS417_00590 5S ribosomal RNA no 0.20
    11 PS417_03285 chromosome partitioning protein no 0.19
    12 PS417_25965 acyl-CoA dehydrogenase no 0.19
    13 PS417_00795 lipoprotein no 0.19
    14 PS417_08315 hypothetical protein no 0.19
    15 PS417_15310 type VI secretion protein no 0.19
    16 PS417_00635 sulfonate ABC transporter ATP-binding protein no 0.18
    17 PS417_25315 membrane protein no 0.18
    18 PS417_25375 hypothetical protein no 0.18
    19 PS417_20955 secretion protein no 0.18
    20 PS417_24405 heme acquisition protein HasAp no 0.18

    Or look for negative cofitness