• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF5573 from Variovorax sp. SCN45

    Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.54
    2 GFF591 Renalase (EC 1.6.3.5), oxidases 1,2-dihydro- and 1,6-dihydro- beta-NAD(P)H isomers back to NAD(P) no 0.54
    3 GFF4954 no description no 0.52
    4 GFF7237 hypothetical protein no 0.51
    5 GFF4789 FIG01126746: hypothetical protein no 0.50
    6 GFF4819 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.49
    7 GFF28 hypothetical protein no 0.49
    8 GFF4494 hypothetical protein no 0.49
    9 GFF6936 ABC transporter, ATP-binding protein no 0.48
    10 GFF4261 RNA polymerase ECF-type sigma factor 0.47 0.48
    11 GFF6085 Transcriptional regulator, AcrR family no 0.47
    12 GFF2726 hypothetical protein no 0.47
    13 GFF4717 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.46
    14 GFF2965 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.46
    15 GFF6415 ATP-dependent DNA helicase RecQ 0.17 0.46
    16 GFF4439 Probable transmembrane protein no 0.46
    17 GFF3536 Alcohol dehydrogenase (EC 1.1.1.1) no 0.45
    18 GFF2448 Acyl-CoA dehydrogenase no 0.45
    19 GFF6841 hypothetical protein no 0.45
    20 GFF2648 Transcriptional regulator, AraC family 0.51 0.45

    Or look for negative cofitness