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  • Top cofit genes for PS417_28515 from Pseudomonas simiae WCS417

    16S rRNA methyltransferase
    SEED: rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
    KEGG: ribosomal RNA small subunit methyltransferase G

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02495 GTPase HflX 0.77 0.31
    2 PS417_05515 hypothetical protein no 0.28
    3 PS417_23155 pilus assembly protein PilW 0.28 0.24
    4 PS417_02145 potassium transporter KefA 0.35 0.23
    5 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.66 0.22
    6 PS417_04005 ornithine decarboxylase 0.38 0.22
    7 PS417_17000 MerR family transcriptional regulator 0.65 0.21
    8 PS417_20435 membrane protein no 0.21
    9 PS417_20600 hypothetical protein no 0.20
    10 PS417_24265 ABC transporter ATP-binding protein 0.75 0.20
    11 PS417_20215 nitrate reductase no 0.20
    12 PS417_19475 pseudouridine synthase 0.58 0.20
    13 PS417_18360 hypothetical protein 0.39 0.20
    14 PS417_28250 cell wall assembly protein 0.34 0.19
    15 PS417_09870 hypothetical protein no 0.19
    16 PS417_04525 16S rRNA methyltransferase 0.91 0.19
    17 PS417_05520 histidine kinase no 0.19
    18 PS417_01180 ribosomal protein S6 modification protein no 0.18
    19 PS417_00740 membrane protein 0.42 0.18
    20 PS417_06390 DEAD/DEAH box helicase no 0.18

    Or look for negative cofitness