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Cofit
Protein
Homologs
Top cofit genes for GFF5572 from
Variovorax sp. SCN45
FIG00984604: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF240
Cytosol aminopeptidase PepA (EC 3.4.11.1)
no
0.74
2
GFF2835
putative TonB-dependent receptor
no
0.66
3
GFF5208
Efflux ABC transporter, permease/ATP-binding protein Reut_A2584
no
0.66
4
GFF4000
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
no
0.65
5
GFF1119
Ribonuclease HI (EC 3.1.26.4)
no
0.65
6
GFF2836
MotA/TolQ/ExbB proton channel family protein
no
0.65
7
GFF2734
DNA topoisomerase IV subunit B (EC 5.99.1.3)
no
0.64
8
GFF5035
Opine oxidase subunit A
no
0.60
9
GFF5776
Gluconokinase (EC 2.7.1.12)
no
0.59
10
GFF232
Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
no
0.59
11
GFF212
Ribosome association toxin RatA
no
0.59
12
GFF2267
Integral membrane protein
no
0.59
13
GFF3258
hypothetical protein
no
0.56
14
GFF5781
Transcriptional regulator, LysR family
no
0.56
15
GFF5521
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128)
no
0.55
16
GFF549
DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
no
0.54
17
GFF2730
DNA topoisomerase IV subunit A (EC 5.99.1.3)
no
0.54
18
GFF6392
hypothetical protein
no
0.53
19
GFF5429
Iron(III) dicitrate transport protein FecA
0.65
0.51
20
GFF4015
KEGG: lactoylglutathione lyase
no
0.51
Or look for
negative cofitness