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  • Top cofit genes for GFF5572 from Variovorax sp. SCN45

    FIG00984604: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.74
    2 GFF2835 putative TonB-dependent receptor no 0.66
    3 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.66
    4 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.65
    5 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.65
    6 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.65
    7 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.64
    8 GFF5035 Opine oxidase subunit A no 0.60
    9 GFF5776 Gluconokinase (EC 2.7.1.12) no 0.59
    10 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.59
    11 GFF212 Ribosome association toxin RatA no 0.59
    12 GFF2267 Integral membrane protein no 0.59
    13 GFF3258 hypothetical protein no 0.56
    14 GFF5781 Transcriptional regulator, LysR family no 0.56
    15 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.55
    16 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.54
    17 GFF2730 DNA topoisomerase IV subunit A (EC 5.99.1.3) no 0.54
    18 GFF6392 hypothetical protein no 0.53
    19 GFF5429 Iron(III) dicitrate transport protein FecA 0.65 0.51
    20 GFF4015 KEGG: lactoylglutathione lyase no 0.51

    Or look for negative cofitness