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  • Top cofit genes for PS417_28450 from Pseudomonas simiae WCS417

    XRE family transcriptional regulator
    SEED: Transcriptional regulator of glmS gene, DeoR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15495 FAD-dependent oxidoreductase no 0.60
    2 PS417_21560 flagellar basal body rod modification protein FlgD 0.25 0.60
    3 PS417_19885 flagellar basal body rod protein FlgG 0.23 0.60
    4 PS417_19860 flagellar hook protein FlgL no 0.59
    5 PS417_19865 flagellar hook protein FlgK no 0.59
    6 PS417_19695 flagellar biosynthesis sigma factor 0.21 0.58
    7 PS417_21555 flagellar hook protein FlgE 0.50 0.58
    8 PS417_19840 flagellar cap protein FliD no 0.57
    9 PS417_19790 ATP synthase 0.58 0.57
    10 PS417_19880 flagellar basal body L-ring protein 0.60 0.57
    11 PS417_19785 flagellar biogenesis protein 0.23 0.56
    12 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA 0.21 0.55
    13 PS417_19765 flagellar hook-length control protein no 0.55
    14 PS417_21595 flagellar biosynthesis protein FlgN 0.55 0.55
    15 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.55
    16 PS417_21570 flagellar basal body rod protein FlgB 0.28 0.54
    17 PS417_19725 flagellar biosynthesis protein FlhB 0.49 0.54
    18 PS417_21565 flagellar basal body rod protein FlgC 0.40 0.54
    19 PS417_19710 flagellar biosynthesis protein FlhA 0.57 0.54
    20 PS417_19825 ATPase AAA 0.55 0.54

    Or look for negative cofitness