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Cofit
Protein
Homologs
Top cofit genes for PS417_28425 from
Pseudomonas simiae WCS417
lysine transporter LysE
SEED: L-lysine permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_18885
GntR family transcriptional regulator
no
0.26
2
PS417
_05255
hypothetical protein
0.29
0.25
3
PS417
_04765
membrane protein
no
0.22
4
PS417
_00625
taurine dioxygenase
no
0.21
5
PS417
_00630
nitrate ABC transporter substrate-binding protein
no
0.21
6
PS417
_03930
thymidine phosphorylase
0.57
0.21
7
PS417
_04770
LysR family transcriptional regulator
no
0.20
8
PS417
_12900
Fe-S protein
no
0.19
9
PS417
_16295
hypothetical protein
no
0.19
10
PS417
_10910
FAD-dependent oxidoreductase
no
0.19
11
PS417
_07455
glutamine amidotransferase
no
0.18
12
PS417
_19610
molybdenum cofactor sulfurase
no
0.18
13
PS417
_19635
lipid kinase
no
0.18
14
PS417
_03630
hypothetical protein
no
0.18
15
PS417
_20585
chemotaxis protein
no
0.18
16
PS417
_06135
glycerol-3-phosphate acyltransferase
no
0.17
17
PS417
_16255
RNA polymerase sigma factor
no
0.17
18
PS417
_07150
permase
no
0.17
19
PS417
_23215
RNA methyltransferase
no
0.17
20
PS417
_00505
peptidase M16
no
0.17
Or look for
negative cofitness