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  • Top cofit genes for GFF5554 from Variovorax sp. SCN45

    FIG00347521: hypothetical protein
    SEED: FIG00347521: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF373 Probable transmembrane protein no 0.60
    2 GFF3090 Colicin V production protein no 0.54
    3 GFF6653 Aminotransferase, class III no 0.53
    4 GFF3374 no description no 0.52
    5 GFF1515 Flagellar hook-length control protein FliK no 0.52
    6 GFF5628 Transcriptional regulator Daci_1847, LysR family no 0.51
    7 GFF7256 Dehydratase, IlvD/Edd family no 0.51
    8 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.50
    9 GFF849 putative carboxylesterase no 0.50
    10 GFF5142 no description no 0.50
    11 GFF5143 no description no 0.50
    12 GFF6782 TRAP transporter solute receptor, TAXI family precursor no 0.50
    13 GFF4333 Transcriptional regulator, LysR family no 0.50
    14 GFF5839 no description no 0.49
    15 GFF5792 Mg2+ and Co2+ transporters no 0.49
    16 GFF7390 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.48
    17 GFF2366 Tricarboxylate transport protein TctC no 0.48
    18 GFF2468 Outer membrane protein assembly factor YaeT no 0.48
    19 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.48
    20 GFF722 hypothetical protein no 0.47

    Or look for negative cofitness