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  • Top cofit genes for PS417_02825 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Urea ABC transporter, permease protein UrtC
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02785 Urease (EC 3.5.1.5) (from data) 0.63 0.23
    2 PS417_06160 beta-(1-3)-glucosyl transferase no 0.22
    3 PS417_02815 urea ABC transporter ATP-binding protein 0.58 0.22
    4 PS417_05775 tail tape measure protein no 0.20
    5 PS417_10200 hypothetical protein 0.59 0.20
    6 PS417_02695 protein hupE 0.49 0.20
    7 PS417_06515 beta-agarase no 0.19
    8 PS417_06975 membrane protein no 0.19
    9 PS417_23785 sulfite oxidase no 0.19
    10 PS417_05135 nucleoid-associated protein no 0.19
    11 PS417_26445 ArsR family transcriptional regulator no 0.19
    12 PS417_13050 N-acetylglucosamine-6-sulfatase no 0.18
    13 PS417_05230 membrane protein no 0.18
    14 PS417_03930 thymidine phosphorylase no 0.18
    15 PS417_17805 microcin B17 processing protein McbC no 0.18
    16 PS417_17840 betaine-aldehyde dehydrogenase 0.49 0.18
    17 PS417_03740 peptidylprolyl isomerase 0.36 0.17
    18 PS417_18870 hypothetical protein no 0.17
    19 PS417_07095 histidine kinase 0.17 0.17
    20 PS417_02830 urea ABC transporter permease 0.75 0.17

    Or look for negative cofitness