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  • Top cofit genes for GFF5546 from Variovorax sp. SCN45

    Lactam utilization protein LamB
    SEED: Lactam utilization protein LamB
    KEGG: UPF0271 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 0.63 0.61
    2 GFF1658 Transcriptional regulator, LysR family 0.28 0.58
    3 GFF1611 no description no 0.56
    4 GFF5788 FIG004556: membrane metalloprotease no 0.56
    5 GFF2924 BUG/TctC family periplasmic protein no 0.55
    6 GFF5530 FIG00931903: hypothetical protein no 0.55
    7 GFF6969 hypothetical protein no 0.54
    8 GFF4121 no description no 0.53
    9 GFF2185 Acetyltransferase, GNAT family no 0.52
    10 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.51
    11 GFF4099 Ser/Thr protein phosphatase family protein no 0.50
    12 GFF2855 Putative hydrolase or acyltransferase no 0.50
    13 GFF2130 hypothetical protein no 0.50
    14 GFF6137 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 no 0.50
    15 GFF4469 Cell division protein FtsA no 0.49
    16 GFF5780 Positive regulator of L-idonate catabolism no 0.49
    17 GFF6534 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.49
    18 GFF5471 Creatinine amidohydrolase (EC 3.5.2.10) no 0.49
    19 GFF2326 Transcriptional regulator, LysR family no 0.49
    20 GFF4636 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no 0.48

    Or look for negative cofitness