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  • Top cofit genes for GFF5545 from Variovorax sp. SCN45

    Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
    SEED: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
    KEGG: pyroglutamyl-peptidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7084 Mobile element protein no 0.60
    2 GFF5382 BUG/TctC family periplasmic protein no 0.57
    3 GFF3295 Endonuclease/exonuclease/phosphatase family protein no 0.57
    4 GFF4277 Small subunit naph/bph dioxygenase no 0.57
    5 GFF4288 Acyl-CoA dehydrogenase no 0.54
    6 GFF1710 hypothetical protein no 0.52
    7 GFF6480 hypothetical protein no 0.52
    8 GFF2117 KEGG: type IV fimbrial biogenesis protein FimT no 0.52
    9 GFF3231 hypothetical protein no 0.52
    10 GFF2308 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center 0.38 0.52
    11 GFF1404 hypothetical protein no 0.51
    12 GFF976 no description no 0.51
    13 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) 0.25 0.50
    14 GFF4112 Rhodanese-related sulfurtransferase, 4 domains no 0.50
    15 GFF7413 no description no 0.50
    16 GFF1546 Tripartite tricarboxylate transporter TctA family no 0.50
    17 GFF310 FIG025233: SAM-dependent methyltransferases no 0.49
    18 GFF6678 Putative inner membrane protein no 0.49
    19 GFF3287 hypothetical protein no 0.49
    20 GFF3525 Protein tyrosine/serine phosphatase no 0.49

    Or look for negative cofitness