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  • Top cofit genes for GFF5544 from Variovorax sp. SCN45

    FIG001614: Membrane protein
    SEED: FIG001614: Membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5295 Ferrichrome-iron receptor no 0.54
    2 GFF2752 FIG00974677: hypothetical protein no 0.53
    3 GFF7051 hypothetical protein 0.41 0.53
    4 GFF915 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.52
    5 GFF1504 Alkylhydroperoxidase AhpD domain protein no 0.52
    6 GFF1793 hypothetical protein no 0.51
    7 GFF4783 Penicillin acylase (EC 3.5.1.11) 0.44 0.51
    8 GFF5668 Uncharacterized MFS-type transporter no 0.51
    9 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) 0.70 0.51
    10 GFF4169 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.51
    11 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    12 GFF359 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.50
    13 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like no 0.50
    14 GFF676 Aminoglycoside 9-phosphotransferase (EC 2.7.1.-) => APH(9)-I no 0.50
    15 GFF5379 Putative hydrolase 0.53 0.50
    16 GFF994 Cytoskeleton protein RodZ no 0.49
    17 GFF250 Homoserine/homoserine lactone efflux protein no 0.48
    18 GFF1363 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.48
    19 GFF7022 Amidohydrolase domain protein no 0.48
    20 GFF1130 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.48

    Or look for negative cofitness