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Cofit
Protein
Homologs
Top cofit genes for GFF5544 from
Variovorax sp. SCN45
FIG001614: Membrane protein
SEED: FIG001614: Membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5295
Ferrichrome-iron receptor
no
0.54
2
GFF2752
FIG00974677: hypothetical protein
no
0.53
3
GFF7051
hypothetical protein
0.41
0.53
4
GFF915
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.52
5
GFF1504
Alkylhydroperoxidase AhpD domain protein
no
0.52
6
GFF1793
hypothetical protein
no
0.51
7
GFF4783
Penicillin acylase (EC 3.5.1.11)
0.44
0.51
8
GFF5668
Uncharacterized MFS-type transporter
no
0.51
9
GFF5684
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
0.70
0.51
10
GFF4169
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.51
11
GFF6319
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.51
12
GFF359
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
no
0.50
13
GFF4983
fumarate reductase/succinate dehydrogenase flavoprotein-like
no
0.50
14
GFF676
Aminoglycoside 9-phosphotransferase (EC 2.7.1.-) => APH(9)-I
no
0.50
15
GFF5379
Putative hydrolase
0.53
0.50
16
GFF994
Cytoskeleton protein RodZ
no
0.49
17
GFF250
Homoserine/homoserine lactone efflux protein
no
0.48
18
GFF1363
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.48
19
GFF7022
Amidohydrolase domain protein
no
0.48
20
GFF1130
Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
no
0.48
Or look for
negative cofitness