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  • Top cofit genes for PS417_02820 from Pseudomonas simiae WCS417

    urea ABC transporter ATP-binding protein
    SEED: Urea ABC transporter, ATPase protein UrtD
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20960 Nitrate-binding regulatory protein (nasS) (from data) 0.52 0.24
    2 PS417_16270 hypothetical protein no 0.24
    3 PS417_17085 fimbrial assembly protein no 0.23
    4 PS417_15320 type VI secretion protein 0.20 0.23
    5 PS417_01440 hypothetical protein no 0.22
    6 PS417_05535 Fis family transcriptional regulator no 0.22
    7 PS417_13855 acetyl-CoA acetyltransferase no 0.22
    8 PS417_02080 histidine ammonia-lyase 0.38 0.22
    9 PS417_12910 alanine racemase no 0.21
    10 PS417_11935 ABC transporter substrate-binding protein 0.52 0.21
    11 PS417_03235 xanthine permease XanP 0.55 0.21
    12 PS417_19500 antibiotic synthesis protein MbtH 0.21 0.21
    13 PS417_17935 endoribonuclease L-PSP no 0.20
    14 PS417_07915 relaxase no 0.20
    15 PS417_16945 LuxR family transcriptional regulator no 0.19
    16 PS417_21575 chemotaxis protein 0.61 0.19
    17 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.19
    18 PS417_27035 FAD-linked oxidase no 0.19
    19 PS417_15180 acyl dehydratase 0.27 0.19
    20 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.19

    Or look for negative cofitness