Top cofit genes for GFF5539 from Variovorax sp. SCN45

Transporter, LysE family
SEED: Putative threonine efflux protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF486		FIG00582348: hypothetical protein	no	0.56
2	GFF4583		TRAP-type C4-dicarboxylate transport system, large permease component	no	0.53
3	GFF3173		Transcriptional regulator, IclR family	no	0.53
4	GFF6033		Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1)	no	0.52
5	GFF2842		RNA polymerase sigma factor RpoS	0.51	0.51
6	GFF431		Esterase/lipase	no	0.51
7	GFF3842		Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives)	no	0.51
8	GFF2357		DNA repair protein RecN	0.27	0.51
9	GFF3885		tRNA pseudouridine(38-40) synthase (EC 5.4.99.12)	no	0.51
10	GFF3251		SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)	no	0.50
11	GFF1773		D-amino acid dehydrogenase (EC 1.4.99.6)	no	0.49
12	GFF631		Formamidase (EC 3.5.1.49)	no	0.49
13	GFF2932		Uncharacterized protein YeaG	no	0.49
14	GFF219		GTP-binding protein TypA/BipA	no	0.48
15	GFF6198		D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83)	no	0.48
16	GFF7376		Transcriptional regulator, LysR family	no	0.48
17	GFF7291		Magnesium and cobalt transport protein CorA	no	0.48
18	GFF6190		3-hydroxyisobutyrate dehydrogenase family protein	no	0.48
19	GFF4780		hypothetical protein	no	0.48
20	GFF3366		Septum site-determining protein MinD	no	0.48

Or look for negative cofitness