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  • Top cofit genes for PS417_28320 from Pseudomonas simiae WCS417

    metal ABC transporter substrate-binding protein
    SEED: Zinc ABC transporter, periplasmic-binding protein ZnuA
    KEGG: zinc/manganese transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11450 AraC family transcriptional regulator no 0.22
    2 PS417_24180 hypothetical protein no 0.21
    3 PS417_28430 alpha-2-macroglobulin no 0.20
    4 PS417_03875 membrane protein no 0.19
    5 PS417_08865 large component of pyruvate transporter (actP-like) (from data) 0.55 0.19
    6 PS417_24275 diguanylate phosphodiesterase no 0.19
    7 PS417_09745 peptide ABC transporter substrate-binding protein no 0.18
    8 PS417_21230 cytochrome C no 0.18
    9 PS417_24170 cell division protein FtsK no 0.18
    10 PS417_00265 GMC family oxidoreductase 0.52 0.18
    11 PS417_10685 acyl-CoA dehydrogenase no 0.18
    12 PS417_01895 poly(R)-hydroxyalkanoic acid synthase no 0.17
    13 PS417_06960 membrane protein 0.13 0.17
    14 PS417_01670 Fe-S-oxidoreductase no 0.17
    15 PS417_10420 shikimate dehydrogenase no 0.17
    16 PS417_06575 DoxX no 0.17
    17 PS417_07010 pseudouridine synthase no 0.17
    18 PS417_06385 DEAD/DEAH box helicase no 0.17
    19 PS417_16465 sirohydrochlorin ferrochelatase 0.65 0.17
    20 PS417_19030 sodium:dicarboxylate symporter no 0.16

    Or look for negative cofitness