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  • Top cofit genes for GFF5533 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6366 T6SS component TssG (ImpH/VasB) no 0.58
    2 GFF6301 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.50
    3 GFF7092 no description no 0.49
    4 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC no 0.48
    5 GFF4404 Mobile element protein no 0.48
    6 GFF3715 Probable malonic semialdehyde reductase RutE (EC 1.1.1.298) no 0.47
    7 GFF4416 Conjugative transfer protein TrbD no 0.47
    8 GFF6573 Conjugative transfer protein TrbF no 0.47
    9 GFF894 FIG024006: iron uptake protein no 0.46
    10 GFF3880 Cell division integral membrane protein, YggT and half-length relatives no 0.46
    11 GFF3908 FIG00582414: hypothetical protein no 0.46
    12 GFF1842 Transcriptional regulator, LysR family no 0.46
    13 GFF2083 putative periplasmic membrane protein no 0.46
    14 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) no 0.46
    15 GFF718 AraC-type DNA-binding domain-containing proteins no 0.45
    16 GFF4968 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit no 0.45
    17 GFF65 hypothetical protein no 0.45
    18 GFF4387 Glycosidases no 0.45
    19 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein no 0.45
    20 GFF3572 Efflux ABC transporter, permease protein no 0.45

    Or look for negative cofitness