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  • Top cofit genes for GFF5532 from Variovorax sp. SCN45

    Putative oxidoreductase
    SEED: Putative oxidoreductase in arabinose utilization cluster

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6831 hypothetical protein no 0.60
    2 GFF6475 hypothetical protein no 0.58
    3 GFF1690 KEGG: DNA-binding protein H-NS no 0.57
    4 GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.54
    5 GFF2708 no description no 0.54
    6 GFF1088 Putative hemolysin no 0.53
    7 GFF7315 no description no 0.53
    8 GFF1570 Muconate cycloisomerase (EC 5.5.1.1) no 0.53
    9 GFF5164 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.23 0.52
    10 GFF5191 Galactose-binding protein regulator 0.32 0.52
    11 GFF761 FIG00537905: hypothetical protein no 0.52
    12 GFF1037 putative membrane protein no 0.52
    13 GFF4459 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) no 0.52
    14 GFF5254 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.50
    15 GFF834 hypothetical protein no 0.50
    16 GFF73 Probable haloacid dehalogenase no 0.50
    17 GFF6569 no description no 0.50
    18 GFF3059 Transcriptional regulator, LysR family no 0.49
    19 GFF4374 UPF0758 family protein no 0.49
    20 GFF1402 3-demethylubiquinone-9 3-methyltransferase no 0.49

    Or look for negative cofitness