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  • Top cofit genes for GFF5531 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3743 Twitching motility protein PilT no 0.65
    2 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.62
    3 GFF984 Protein phosphatase 2C-like no 0.62
    4 GFF3038 hypothetical protein no 0.61
    5 GFF6290 RNA polymerase sigma-54 factor RpoN no 0.61
    6 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.60
    7 GFF5414 hypothetical protein no 0.60
    8 GFF2155 Signal transduction histidine kinase CheA no 0.60
    9 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.60
    10 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.59
    11 GFF5321 Type IV pilus biogenesis protein PilO no 0.59
    12 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.59
    13 GFF5128 hypothetical protein no 0.59
    14 GFF2153 type IV pili signal transduction protein PilI no 0.59
    15 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.58
    16 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.58
    17 GFF2154 twitching motility protein PilJ no 0.57
    18 GFF33 Type IV pilus biogenesis protein PilZ no 0.57
    19 GFF5320 Type IV pilus biogenesis protein PilN no 0.57
    20 GFF2509 Type IV fimbrial assembly protein PilC no 0.57

    Or look for negative cofitness