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  • Top cofit genes for GFF5529 from Variovorax sp. SCN45

    Putative outer membrane protein
    SEED: Putative outer membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7322 hypothetical protein no 0.61
    2 GFF6067 Permease of the drug/metabolite transporter (DMT) superfamily no 0.61
    3 GFF2683 Protein containing domains DUF404, DUF407 no 0.56
    4 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.56
    5 GFF4699 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.55
    6 GFF4396 Mobile element protein no 0.55
    7 GFF7323 Transcriptional response regulatory protein GlrR no 0.54
    8 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF 0.27 0.54
    9 GFF7075 no description no 0.54
    10 GFF3650 FIG00932140: hypothetical protein no 0.53
    11 GFF4395 Octaprenyl diphosphate synthase (EC 2.5.1.90) no 0.53
    12 GFF4405 hypothetical protein no 0.53
    13 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.52
    14 GFF5519 Transcriptional regulator no 0.52
    15 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) no 0.51
    16 GFF4418 Conjugative transfer protein TrbJ no 0.50
    17 GFF5402 Transcriptional regulator, IclR family no 0.50
    18 GFF5515 Lysophospholipase (EC 3.1.1.5) no 0.50
    19 GFF6407 Phytanoyl-CoA dioxygenase no 0.50
    20 GFF1260 no description no 0.50

    Or look for negative cofitness