Top cofit genes for GFF5528 from Variovorax sp. SCN45

Conjugative transfer protein TrbL
SEED: Conjugative transfer protein TrbL

Rank Hit Name Description Conserved? Cofitness  
1 GFF694 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) no 0.62
2 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) no 0.61
3 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.60
4 GFF4899 Transcriptional regulator, Crp/Fnr family no 0.60
5 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.58
6 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family no 0.58
7 GFF3984 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.57
8 GFF7342 Oxidoreductase no 0.57
9 GFF3001 Metal chaperone, involved in Zn homeostasis no 0.57
10 GFF4718 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.57
11 GFF1146 Pyrophosphate-energized proton pump (EC 3.6.1.1) no 0.55
12 GFF3541 hypothetical protein no 0.55
13 GFF2366 Tricarboxylate transport protein TctC no 0.55
14 GFF3030 Uncharacterized protein ImpA no 0.54
15 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR no 0.54
16 GFF1536 BUG/TctC family periplasmic protein no 0.53
17 GFF191 (Y14336) putative extracellular protein containing predicted 35aa signal peptide no 0.53
18 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) no 0.53
19 GFF2357 DNA repair protein RecN no 0.53
20 GFF6328 LPS-assembly lipoprotein LptE no 0.53

Or look for negative cofitness