• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_28230 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Phosphogluconate repressor HexR, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22620 pyruvate kinase 0.93 0.51
    2 PS417_22775 histidine kinase no 0.37
    3 PS417_06680 nuclease PIN no 0.36
    4 PS417_09540 penicillin-binding protein 2 no 0.34
    5 PS417_23385 cytochrome o ubiquinol oxidase subunit I 0.45 0.33
    6 PS417_26225 electron transfer flavoprotein subunit beta no 0.33
    7 PS417_23390 ubiquinol oxidase subunit II 0.43 0.33
    8 PS417_23370 protoheme IX farnesyltransferase 0.45 0.32
    9 PS417_22125 porin no 0.32
    10 PS417_23375 cytochrome C oxidase 0.46 0.32
    11 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.37 0.31
    12 PS417_22780 XRE family transcriptional regulator 0.51 0.31
    13 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) 0.41 0.30
    14 PS417_26235 (Fe-S)-binding protein no 0.30
    15 PS417_01955 peptidase 0.43 0.30
    16 PS417_02975 3-dehydroquinate dehydratase 0.40 0.30
    17 PS417_26230 electron transfer flavoprotein subunit alpha no 0.30
    18 PS417_28075 phosphate ABC transporter permease 0.62 0.29
    19 PS417_21430 3-oxoacyl-ACP synthase 0.31 0.29
    20 PS417_07165 dihydrodipicolinate synthase 0.25 0.29

    Or look for negative cofitness