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  • Top cofit genes for GFF5506 from Variovorax sp. SCN45

    Transcriptional regulator Bmul_5214, AsnC family
    SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3034 no description no 0.59
    2 GFF2969 acyl-CoA synthetase (NDP forming type) no 0.57
    3 GFF6357 T6SS forkhead associated domain protein ImpI/VasC no 0.55
    4 GFF6480 hypothetical protein no 0.54
    5 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.52
    6 GFF3422 Lipoprotein-related protein no 0.51
    7 GFF310 FIG025233: SAM-dependent methyltransferases no 0.51
    8 GFF6527 Transcriptional regulator, AcrR family no 0.51
    9 GFF518 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains no 0.51
    10 GFF3789 hypothetical protein no 0.50
    11 GFF1729 HIPA PROTEIN no 0.50
    12 GFF3670 Two-component system sensor histidine kinase no 0.49
    13 GFF5599 hypothetical protein no 0.49
    14 GFF2367 Transcriptional regulator, LysR family no 0.49
    15 GFF1539 RsbT co-antagonist protein RsbRA no 0.49
    16 GFF922 hypothetical protein no 0.48
    17 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.48
    18 GFF2283 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.48
    19 GFF3218 Phage tail fiber no 0.48
    20 GFF5640 Putative formate dehydrogenase oxidoreductase protein no 0.48

    Or look for negative cofitness