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  • Top cofit genes for PS417_28170 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Transcriptional regulator
    KEGG: transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12760 histidine kinase 0.33 0.29
    2 PS417_25280 methyltransferase no 0.28
    3 PS417_02160 hypothetical protein no 0.26
    4 PS417_23065 hypothetical protein no 0.25
    5 PS417_25695 peroxiredoxin 0.23 0.24
    6 PS417_05800 hypothetical protein no 0.23
    7 PS417_17835 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase no 0.23
    8 PS417_27275 hypothetical protein no 0.22
    9 PS417_14485 malto-oligosyltrehalose trehalohydrolase 0.28 0.22
    10 PS417_09825 hypothetical protein no 0.22
    11 PS417_04820 poly(beta-D-mannuronate) C5 epimerase no 0.22
    12 PS417_03900 type II secretion system protein F no 0.21
    13 PS417_13135 hypothetical protein no 0.21
    14 PS417_24860 hypothetical protein no 0.21
    15 PS417_15885 GCN5 family acetyltransferase 0.30 0.21
    16 PS417_11945 hypothetical protein no 0.20
    17 PS417_17645 RND transporter no 0.20
    18 PS417_08930 hypothetical protein no 0.20
    19 PS417_15285 type VI secretion protein no 0.20
    20 PS417_12795 alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase no 0.19

    Or look for negative cofitness