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  • Top cofit genes for PS417_28165 from Pseudomonas simiae WCS417

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: GntR family transcriptional regulator / MocR family aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_10930 D-xylose ABC transporter permease 0.54 0.21
    2 PS417_23445 aldolase no 0.20
    3 PS417_17150 phosphonoacetaldehyde hydrolase 0.47 0.20
    4 PS417_25100 hypothetical protein no 0.20
    5 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase no 0.20
    6 PS417_15980 histidine kinase no 0.19
    7 PS417_08180 glycosyl transferase no 0.19
    8 PS417_15025 aminoglycoside phosphotransferase no 0.19
    9 PS417_20675 hydroxyacylglutathione hydrolase no 0.18
    10 PS417_08130 aspartate aminotransferase no 0.18
    11 PS417_26105 ABC transporter permease no 0.18
    12 PS417_23800 ketol-acid reductoisomerase 0.46 0.18
    13 PS417_18530 O-succinylhomoserine sulfhydrylase 0.45 0.18
    14 PS417_12310 methionine synthase 0.50 0.18
    15 PS417_23810 acetolactate synthase 3 catalytic subunit 0.46 0.18
    16 PS417_08165 UDP-glucose 4-epimerase 0.56 0.18
    17 PS417_16010 alkanesulfonate monooxygenase 0.35 0.18
    18 PS417_14835 amidase 0.67 0.18
    19 PS417_26890 dihydroxy-acid dehydratase 0.52 0.18
    20 PS417_08190 membrane protein 0.47 0.17

    Or look for negative cofitness