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  • Top cofit genes for PS417_28155 from Pseudomonas simiae WCS417

    ABC transporter substrate-binding protein
    SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)
    KEGG: putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16465 sirohydrochlorin ferrochelatase 0.16 0.26
    2 PS417_26730 pyrroline-5-carboxylate reductase no 0.26
    3 PS417_24745 gamma-glutamyl phosphate reductase no 0.25
    4 PS417_12290 sulfite reductase 0.18 0.24
    5 PS417_22385 quinolinate synthase A no 0.23
    6 PS417_23545 gamma-glutamyl kinase no 0.23
    7 PS417_17415 histidine kinase no 0.22
    8 PS417_03925 nicotinate-nucleotide pyrophosphorylase no 0.22
    9 PS417_01605 phosphoglycerate mutase no 0.21
    10 PS417_12510 hypothetical protein no 0.21
    11 PS417_22230 class I peptide chain release factor no 0.21
    12 PS417_20125 phosphoribosylglycinamide formyltransferase 0.12 0.21
    13 PS417_01755 proline-specific permease no 0.21
    14 PS417_16460 hypothetical protein 0.41 0.21
    15 PS417_04885 type IV secretion protein Rhs no 0.20
    16 PS417_19240 peptidase M42 no 0.20
    17 PS417_21750 acetyl-CoA synthetase no 0.20
    18 PS417_17505 LuxR family transcriptional regulator 0.23 0.20
    19 PS417_00180 tryptophan synthase subunit alpha no 0.19
    20 PS417_20465 hypothetical protein no 0.19

    Or look for negative cofitness