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Cofit
Protein
Homologs
Top cofit genes for PS417_00280 from
Pseudomonas simiae WCS417
radical SAM protein
SEED: Radical SAM domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_20985
porin
no
0.33
2
PS417
_17085
fimbrial assembly protein
0.28
0.31
3
PS417
_17010
AMP-binding protein
0.14
0.29
4
PS417
_04375
ABC transporter ATP-binding protein
0.30
0.28
5
PS417
_12640
GNAT family acetyltransferase
no
0.28
6
PS417
_03055
histidine kinase
no
0.27
7
PS417
_21895
nuclease PIN
no
0.27
8
PS417
_03065
peptidase A24
no
0.27
9
PS417
_17080
lipoprotein
0.24
0.27
10
PS417
_08135
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.25
11
PS417
_00605
peptide transporter
no
0.25
12
PS417
_03095
ATPase
0.23
0.25
13
PS417
_23770
exodeoxyribonuclease V subunit alpha
0.52
0.25
14
PS417
_05230
membrane protein
no
0.24
15
PS417
_27800
exodeoxyribonuclease III
no
0.24
16
PS417
_03075
hypothetical protein
no
0.24
17
PS417
_18700
LysR family transcriptional regulator
0.21
0.24
18
PS417
_17105
spore coat protein
no
0.24
19
PS417
_15230
4-hydroxyacetophenone monooxygenase
0.61
0.24
20
PS417
_08265
hypothetical protein
no
0.24
Or look for
negative cofitness