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  • Top cofit genes for PS417_28145 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19020 dimethylmenaquinone methyltransferase no 0.28
    2 PS417_01915 ATP-dependent protease ATP-binding subunit HslU no 0.25
    3 PS417_23655 AsnC family transcriptional regulator no 0.25
    4 PS417_27770 hypothetical protein 0.36 0.24
    5 PS417_22210 AraC family transcriptional regulator 0.47 0.24
    6 PS417_26555 endoribonuclease L-PSP no 0.24
    7 PS417_13930 cbb3-type cytochrome c oxidase subunit I 0.23 0.23
    8 PS417_12650 magnesium transporter no 0.21
    9 PS417_27595 recombinase XerC 0.45 0.21
    10 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.21
    11 PS417_26685 hypothetical protein no 0.20
    12 PS417_08930 hypothetical protein no 0.20
    13 PS417_27650 chemotaxis protein 0.10 0.20
    14 PS417_27800 exodeoxyribonuclease III no 0.20
    15 PS417_06710 beta-ketoadipyl CoA thiolase 0.56 0.20
    16 PS417_15285 type VI secretion protein no 0.20
    17 PS417_11245 RNA polymerase subunit sigma-24 0.38 0.20
    18 PS417_20915 hypothetical protein 0.29 0.19
    19 PS417_13140 oxidoreductase no 0.19
    20 PS417_27205 adenylate cyclase no 0.19

    Or look for negative cofitness