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  • Top cofit genes for GFF5492 from Variovorax sp. SCN45

    Putative transmembrane lipoprotein
    SEED: putative lipoprotein transmembrane

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6889 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase no 0.61
    2 GFF3852 Tetrapyrrole methylase family protein 0.57 0.60
    3 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B 0.26 0.59
    4 GFF5409 FIG00576366: hypothetical protein 0.35 0.54
    5 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) no 0.52
    6 GFF4249 hypothetical protein no 0.52
    7 GFF1656 hypothetical protein no 0.52
    8 GFF4897 Probable ALANIN-rich signal peptide protein no 0.51
    9 GFF3823 FIG00581576: hypothetical protein no 0.50
    10 GFF3689 FIG01198523: hypothetical protein 0.24 0.50
    11 GFF1149 FIG110192: hypothetical protein no 0.50
    12 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.50
    13 GFF841 zinc finger, SWIM-type no 0.50
    14 GFF1473 Amidase family protein BBta_1912 no 0.49
    15 GFF3185 SAM-dependent methyltransferase no 0.49
    16 GFF3935 RNA polymerase ECF-type sigma factor 0.24 0.49
    17 GFF1331 Transcriptional regulator, AraC family no 0.48
    18 GFF318 Uncharacterized protein YjgR no 0.48
    19 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.47
    20 GFF2752 FIG00974677: hypothetical protein no 0.47

    Or look for negative cofitness