Top cofit genes for GFF5490 from Variovorax sp. SCN45

Uncharacterized protein with LysM domain, COG1652
SEED: Uncharacterized protein with LysM domain, COG1652

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5419		Type IV pilus biogenesis protein PilE	0.95	1.00
2	GFF5323		Type IV pilus biogenesis protein PilQ	0.99	1.00
3	GFF5418		Type IV fimbrial biogenesis protein PilY1	no	1.00
4	GFF2510		Type IV fimbrial assembly, ATPase PilB	0.99	0.99
5	GFF5319		Type IV pilus biogenesis protein PilM	0.99	0.99
6	GFF2509		Type IV fimbrial assembly protein PilC	0.99	0.99
7	GFF5417		hypothetical protein	no	0.99
8	GFF5322		Type IV pilus biogenesis protein PilP	0.99	0.99
9	GFF33		Type IV pilus biogenesis protein PilZ	0.98	0.99
10	GFF5321		Type IV pilus biogenesis protein PilO	0.99	0.99
11	GFF3826		Response regulator receiver:LytTr DNA-binding region	0.96	0.99
12	GFF5320		Type IV pilus biogenesis protein PilN	0.98	0.99
13	GFF5416		Type IV fimbrial biogenesis protein PilW	0.89	0.99
14	GFF993		Type IV pilus biogenesis protein PilF	0.95	0.99
15	GFF5414		hypothetical protein	no	0.99
16	GFF2508		Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)	0.98	0.99
17	GFF2519		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	0.99	0.99
18	GFF5415		Type IV fimbrial biogenesis protein PilV	0.94	0.99
19	GFF3068		FIG00538108: hypothetical protein	0.99	0.98
20	GFF6075		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	0.99	0.98

Or look for negative cofitness