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  • Top cofit genes for GFF5488 from Variovorax sp. SCN45

    Protein of unknown function Smg
    SEED: Protein of unknown function Smg
    KEGG: Smg protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4801 DedA protein no 0.67
    2 GFF3955 Histidinol-phosphate aminotransferase (EC 2.6.1.9) no 0.62
    3 GFF1119 Ribonuclease HI (EC 3.1.26.4) 0.37 0.62
    4 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.61
    5 GFF2835 putative TonB-dependent receptor no 0.60
    6 GFF4396 Mobile element protein no 0.60
    7 GFF5817 Two-component system sensor histidine kinase no 0.59
    8 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.58
    9 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.35 0.58
    10 GFF6909 Amidohydrolase no 0.57
    11 GFF312 FIG021862: membrane protein, exporter no 0.57
    12 GFF6392 hypothetical protein no 0.57
    13 GFF890 Two-component system sensor histidine kinase no 0.56
    14 GFF6294 Cell division protein no 0.56
    15 GFF1116 Membrane-bound lytic murein transglycosylase D 0.17 0.56
    16 GFF5865 Probable iron export permease protein FetB no 0.56
    17 GFF2653 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) 0.45 0.55
    18 GFF2937 Transcriptional regulator, LysR family no 0.55
    19 GFF5429 Iron(III) dicitrate transport protein FecA no 0.55
    20 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) no 0.55

    Or look for negative cofitness