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  • Top cofit genes for GFF5487 from Variovorax sp. SCN45

    Thymidine phosphorylase (EC 2.4.2.4)
    SEED: Thymidine phosphorylase (EC 2.4.2.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.94
    2 GFF183 Virulence protein no 0.89
    3 GFF5868 hypothetical protein no 0.87
    4 GFF5870 hypothetical protein no 0.87
    5 GFF5064 Exonuclease SbcC 0.94 0.85
    6 GFF5869 internalin, putative no 0.84
    7 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.83
    8 GFF5871 hypothetical protein no 0.79
    9 GFF5409 FIG00576366: hypothetical protein no 0.77
    10 GFF6037 Transcriptional regulator, Crp/Fnr family no 0.76
    11 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.75
    12 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.74
    13 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.73
    14 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.73
    15 GFF5150 Taurine ABC transporter, permease protein TauC no 0.72
    16 GFF5957 Uncharacterized MFS-type transporter no 0.72
    17 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.72
    18 GFF5668 Uncharacterized MFS-type transporter no 0.71
    19 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.70
    20 GFF4955 hypothetical protein no 0.70

    Or look for negative cofitness