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  • Top cofit genes for GFF5472 from Variovorax sp. SCN45

    SEED: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3759 Uridine kinase family protein YggC homolog no 0.59
    2 GFF6652 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.56
    3 GFF4703 Xylitol dehydrogenase (EC 1.1.1.9) no 0.55
    4 GFF5858 heme uptake regulator no 0.52
    5 GFF2050 hypothetical protein no 0.51
    6 GFF1742 hypothetical protein no 0.50
    7 GFF1090 Phosphohistidine phosphatase SixA no 0.49
    8 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.48
    9 GFF6314 hypothetical protein no 0.48
    10 GFF1819 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family no 0.47
    11 GFF1062 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.47
    12 GFF3880 Cell division integral membrane protein, YggT and half-length relatives no 0.47
    13 GFF2566 AsmA no 0.47
    14 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.46
    15 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein no 0.46
    16 GFF6573 Conjugative transfer protein TrbF no 0.46
    17 GFF4955 hypothetical protein no 0.45
    18 GFF2938 Rieske (2Fe-2S) domain protein no 0.45
    19 GFF4736 Nitrate ABC transporter, permease protein no 0.45
    20 GFF6241 Transglutaminase-like domain no 0.45

    Or look for negative cofitness