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  • Top cofit genes for GFF5470 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
    KEGG: sulfonate/nitrate/taurine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6354 T6SS component TssK (ImpJ/VasE) no 0.60
    2 GFF4727 Two-component transcriptional response regulator, LuxR family no 0.60
    3 GFF1875 no description no 0.59
    4 GFF600 Metal-dependent phosphohydrolase, HD subdomain no 0.56
    5 GFF5140 no description no 0.55
    6 GFF3038 hypothetical protein no 0.55
    7 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.55
    8 GFF504 SAM-dependent methyltransferases no 0.55
    9 GFF6440 Molybdate-binding domain of ModE no 0.54
    10 GFF1948 Phage integrase no 0.54
    11 GFF675 KEGG: 2'-5' RNA ligase no 0.54
    12 GFF2416 Transcriptional regulator YbhD, LysR family no 0.54
    13 GFF6438 hypothetical protein no 0.53
    14 GFF6434 Inner membrane protein YqiK no 0.53
    15 GFF3002 Cobalt-containing nitrile hydratase subunit beta (EC 4.2.1.84) 0.22 0.53
    16 GFF5376 hypothetical protein no 0.53
    17 GFF652 bacteriophytochrome heme oxygenase BphO no 0.53
    18 GFF2120 Type IV fimbrial biogenesis protein PilX no 0.52
    19 GFF4069 DNA-binding heavy metal response regulator no 0.52
    20 GFF43 hypothetical protein no 0.52

    Or look for negative cofitness