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  • Top cofit genes for PS417_27960 from Pseudomonas simiae WCS417

    Hcp1 family type VI secretion system effector
    SEED: Uncharacterized protein ImpD
    KEGG: type VI secretion system secreted protein Hcp

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16750 ABC transporter ATP-binding protein 0.47 0.22
    2 PS417_04445 cupin no 0.22
    3 PS417_11975 diguanylate cyclase no 0.19
    4 PS417_19310 MFS transporter 0.42 0.19
    5 PS417_03045 hypothetical protein 0.59 0.18
    6 PS417_08190 membrane protein 0.64 0.17
    7 PS417_20660 hypothetical protein no 0.17
    8 PS417_21990 LacI family transcriptional regulator no 0.17
    9 PS417_13965 acetoin utilization protein 0.12 0.17
    10 PS417_23485 antibiotic biosynthesis monooxygenase no 0.17
    11 PS417_06885 dihydrodipicolinate synthase no 0.17
    12 PS417_27585 diaminopimelate epimerase no 0.17
    13 PS417_05360 hypothetical protein no 0.17
    14 PS417_25760 spermidine/putrescine ABC transporter ATP-binding protein 0.47 0.16
    15 PS417_14575 MFS transporter no 0.16
    16 PS417_20650 hypothetical protein no 0.16
    17 PS417_14800 diguanylate cyclase no 0.16
    18 PS417_01485 ABC transporter permease 0.33 0.16
    19 PS417_11200 membrane protein 0.52 0.16
    20 PS417_10665 hypothetical protein no 0.16

    Or look for negative cofitness