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  • Top cofit genes for PS417_27940 from Pseudomonas simiae WCS417

    type VI secretion protein
    SEED: Uncharacterized protein ImpI/VasC
    KEGG: type VI secretion system protein ImpI

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02210 diguanylate cyclase no 0.24
    2 PS417_19820 histidine kinase 0.71 0.24
    3 PS417_19800 flagellar motor switch protein FliG 0.75 0.24
    4 PS417_19685 protein phosphatase 0.52 0.23
    5 PS417_19615 chemotaxis protein CheW no 0.22
    6 PS417_22190 diguanylate cyclase no 0.21
    7 PS417_19870 flagellar rod assembly protein FlgJ 0.23 0.21
    8 PS417_14730 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) no 0.21
    9 PS417_19805 flagellar M-ring protein FliF 0.80 0.21
    10 PS417_19785 flagellar biogenesis protein 0.17 0.21
    11 PS417_19645 chemotaxis protein no 0.20
    12 PS417_19620 hypothetical protein no 0.20
    13 PS417_21565 flagellar basal body rod protein FlgC 0.81 0.20
    14 PS417_19740 flagellar biosynthesis protein flip 0.72 0.20
    15 PS417_21595 flagellar biosynthesis protein FlgN 0.78 0.20
    16 PS417_18705 succinate dehydrogenase no 0.20
    17 PS417_02815 urea ABC transporter ATP-binding protein no 0.20
    18 PS417_19710 flagellar biosynthesis protein FlhA 0.78 0.20
    19 PS417_19760 flagellar basal body protein FliL 0.27 0.20
    20 PS417_21570 flagellar basal body rod protein FlgB 0.77 0.20

    Or look for negative cofitness