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  • Top cofit genes for PS417_27935 from Pseudomonas simiae WCS417

    type VI secretion protein
    SEED: Type VI secretion lipoprotein/VasD
    KEGG: type VI secretion system protein VasD

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12455 hydrolase no 0.23
    2 PS417_08985 histidine kinase no 0.22
    3 PS417_10965 chemotaxis protein no 0.22
    4 PS417_09890 hypothetical protein no 0.22
    5 PS417_15285 type VI secretion protein no 0.21
    6 PS417_15100 BatB protein 0.33 0.21
    7 PS417_14960 ATPase no 0.21
    8 PS417_12550 chemotaxis protein 0.19 0.20
    9 PS417_03215 8-oxoguanine deaminase no 0.20
    10 PS417_11175 AraC family transcriptional regulator 0.24 0.20
    11 PS417_27050 ABC transporter substrate-binding protein no 0.20
    12 PS417_17205 LysR family transcriptional regulator 0.36 0.20
    13 PS417_18225 phenol degradation protein meta no 0.20
    14 PS417_22410 hypothetical protein no 0.20
    15 PS417_26545 16S rRNA methyltransferase no 0.18
    16 PS417_09865 hypothetical protein no 0.18
    17 PS417_20705 cbb3-type cytochrome c oxidase subunit II no 0.18
    18 PS417_04475 hypothetical protein no 0.18
    19 PS417_19365 ABC transporter substrate-binding protein no 0.18
    20 PS417_02520 chemotaxis protein no 0.18

    Or look for negative cofitness