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  • Top cofit genes for PS417_27930 from Pseudomonas simiae WCS417

    type VI secretion protein
    SEED: Uncharacterized protein ImpJ/VasE
    KEGG: type VI secretion system protein ImpJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01210 hypothetical protein no 0.42
    2 PS417_21020 phosphoenolpyruvate synthase 0.58 0.30
    3 PS417_22995 PTS N-acetyl-D-glucosamine transporter no 0.26
    4 PS417_23000 PTS N-acetyl-D-glucosamine transporter no 0.25
    5 PS417_17585 ornithine cyclodeaminase 0.51 0.23
    6 PS417_05410 membrane protein no 0.21
    7 PS417_21260 hypothetical protein no 0.21
    8 PS417_17580 citrulline utilization hydrolase (from data) no 0.21
    9 PS417_22645 C4-dicarboxylate ABC transporter no 0.19
    10 PS417_01700 lipocalin no 0.19
    11 PS417_22985 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) no 0.19
    12 PS417_22980 GntR family transcriptional regulator no 0.19
    13 PS417_25290 hypothetical protein no 0.19
    14 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.45 0.18
    15 PS417_20125 phosphoribosylglycinamide formyltransferase 0.34 0.18
    16 PS417_15280 type VI secretion protein no 0.18
    17 PS417_25280 methyltransferase no 0.18
    18 PS417_16570 isocitrate lyase 0.63 0.18
    19 PS417_27985 type VI secretion protein ImpA 0.88 0.18
    20 PS417_19965 histidine kinase no 0.18

    Or look for negative cofitness