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  • Top cofit genes for GFF5457 from Variovorax sp. SCN45

    L-threonate dehydrogenase (NAD+)
    SEED: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
    KEGG: 3-hydroxyisobutyrate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3288 hypothetical protein no 0.49
    2 GFF5615 Citrate synthase (si) (EC 2.3.3.1) no 0.48
    3 GFF1072 no description no 0.46
    4 GFF2940 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) no 0.45
    5 GFF7010 no description no 0.45
    6 GFF5587 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) no 0.44
    7 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) no 0.43
    8 GFF2147 no description no 0.43
    9 GFF870 TonB-dependent receptor no 0.43
    10 GFF5848 Flagellar motor protein no 0.43
    11 GFF6615 putative plasmid stabilization protein no 0.43
    12 GFF6583 Transcriptional regulator, LysR family no 0.43
    13 GFF1034 UPF0313 [4Fe-4S] protein YgiQ no 0.42
    14 GFF7209 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.42
    15 GFF2386 Response regulator BaeR no 0.42
    16 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.42
    17 GFF2593 Integral membrane protein no 0.41
    18 GFF5226 Probable cytochrome c2 0.37 0.41
    19 GFF4125 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.41
    20 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 no 0.41

    Or look for negative cofitness