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  • Top cofit genes for GFF5453 from Variovorax sp. SCN45

    Alkaline phosphatase (EC 3.1.3.1)
    SEED: Alkaline phosphatase (EC 3.1.3.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.56
    2 GFF4855 Electron transfer flavoprotein, beta subunit no 0.55
    3 GFF2773 BUG/TctC family periplasmic protein no 0.53
    4 GFF1513 Cytochrome c551/c552 no 0.51
    5 GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.49
    6 GFF6502 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.48
    7 GFF2551 Endonuclease/exonuclease/phosphatase no 0.47
    8 GFF580 Rhodanese domain protein UPF0176, Betaproteobacterial subgroup no 0.47
    9 GFF1888 BUG/TctC family periplasmic protein no 0.46
    10 GFF6580 CopG domain-containing protein no 0.46
    11 GFF6396 hypothetical protein no 0.46
    12 GFF7256 Dehydratase, IlvD/Edd family no 0.46
    13 GFF500 Lysine exporter protein (LYSE/YGGA) no 0.46
    14 GFF942 Iron-sulfur cluster-binding protein no 0.46
    15 GFF2121 Type IV fimbrial biogenesis protein PilY1 no 0.46
    16 GFF801 Murein hydrolase activator NlpD no 0.45
    17 GFF5437 Amine oxidase, flavin-containing no 0.45
    18 GFF7389 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.45
    19 GFF265 RND efflux system, membrane fusion protein no 0.44
    20 GFF3597 TRAP-type C4-dicarboxylate transport system, small permease component no 0.44

    Or look for negative cofitness