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  • Top cofit genes for GFF5444 from Variovorax sp. SCN45

    FIG005080: Possible exported protein
    SEED: FIG005080: Possible exported protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3350 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.60
    2 GFF6977 Cytochrome b561 no 0.59
    3 GFF4214 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM no 0.59
    4 GFF5091 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) no 0.59
    5 GFF3052 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.59
    6 GFF4499 Uncharacterized DUF1427 protein PA2697 no 0.58
    7 GFF5047 hypothetical protein no 0.57
    8 GFF1567 Demethylmenaquinone methyltransferase-like protein no 0.57
    9 GFF3356 Probable transmembrane protein no 0.56
    10 GFF3391 Chlorogenate esterase no 0.55
    11 GFF2221 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    12 GFF426 Cobyric acid synthase (EC 6.3.5.10) 0.36 0.55
    13 GFF648 integral membrane sensor signal transduction histidine kinase no 0.54
    14 GFF3058 Demethylmenaquinone methyltransferase-like protein no 0.54
    15 GFF3103 Cys-tRNA(Pro) deacylase YbaK no 0.53
    16 GFF2695 no description no 0.53
    17 GFF5188 no description no 0.53
    18 GFF3173 Transcriptional regulator, IclR family no 0.52
    19 GFF3228 hypothetical protein no 0.52
    20 GFF117 no description no 0.52

    Or look for negative cofitness