Top cofit genes for GFF5441 from Variovorax sp. SCN45

4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF6523		hypothetical protein	no	0.55
2	GFF6841		hypothetical protein	no	0.55
3	GFF6459		Two-component transcriptional regulatory protein BasR/PmrA (activated by BasS/PmrB)	no	0.55
4	GFF6415		ATP-dependent DNA helicase RecQ	0.65	0.55
5	GFF5055		BUG/TctC family periplasmic protein	no	0.54
6	GFF7288		Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2)	0.38	0.53
7	GFF4568		Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)	no	0.53
8	GFF6408		Urocanate hydratase (EC 4.2.1.49)	0.28	0.52
9	GFF7189		dioxygenase, TauD/TfdA family	no	0.52
10	GFF4552		Nitrilotriacetate monooxygenase component B (EC 1.14.13.-)	0.29	0.51
11	GFF4246		FIG00464377: hypothetical protein	no	0.51
12	GFF2593		Integral membrane protein	no	0.51
13	GFF4863		Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	no	0.51
14	GFF794		KEGG: RNA polymerase sigma-70 factor, ECF subfamily	no	0.50
15	GFF334		Transcriptional regulator, AraC family	no	0.49
16	GFF3911		Putative phosphoesterase	0.26	0.49
17	GFF7378		protein of unknown function DUF1311	no	0.49
18	GFF6838		BUG/TctC family periplasmic protein	no	0.48
19	GFF4272		BUG/TctC family periplasmic protein	no	0.48
20	GFF1828		phosphodiesterase I	no	0.47

Or look for negative cofitness