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Cofit
Protein
Homologs
Top cofit genes for GFF5434 from
Variovorax sp. SCN45
FIG097052: Sugar transporter
SEED: FIG097052: Sugar transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5264
Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1)
no
0.65
2
GFF6070
Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13)
no
0.61
3
GFF2936
3-dehydroquinate dehydratase II (EC 4.2.1.10)
no
0.61
4
GFF4178
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
no
0.60
5
GFF198
Isochorismate pyruvate-lyase (EC 4.2.99.21)
no
0.60
6
GFF5154
DNA-binding transcriptional regulator, MocR family / aminotransferase domain
no
0.60
7
GFF1179
no description
no
0.59
8
GFF1353
Short-chain dehydrogenase/reductase SDR
no
0.58
9
GFF203
hypothetical protein
no
0.58
10
GFF237
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.57
11
GFF4553
RNA chaperone ProQ
no
0.56
12
GFF232
Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
no
0.56
13
GFF6328
LPS-assembly lipoprotein LptE
no
0.56
14
GFF6324
Kup system potassium uptake protein
no
0.56
15
GFF5259
Na+/solute symporter
no
0.55
16
GFF2538
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
no
0.55
17
GFF3367
Septum site-determining protein MinC
no
0.55
18
GFF4435
hypothetical protein
no
0.55
19
GFF2045
Peptide chain release factor 3
no
0.55
20
GFF2109
FIG00454067: hypothetical protein
no
0.54
Or look for
negative cofitness