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  • Top cofit genes for GFF5434 from Variovorax sp. SCN45

    FIG097052: Sugar transporter
    SEED: FIG097052: Sugar transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) no 0.65
    2 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.61
    3 GFF2936 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.61
    4 GFF4178 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) no 0.60
    5 GFF198 Isochorismate pyruvate-lyase (EC 4.2.99.21) no 0.60
    6 GFF5154 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.60
    7 GFF1179 no description no 0.59
    8 GFF1353 Short-chain dehydrogenase/reductase SDR no 0.58
    9 GFF203 hypothetical protein no 0.58
    10 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.57
    11 GFF4553 RNA chaperone ProQ no 0.56
    12 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.56
    13 GFF6328 LPS-assembly lipoprotein LptE no 0.56
    14 GFF6324 Kup system potassium uptake protein no 0.56
    15 GFF5259 Na+/solute symporter no 0.55
    16 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.55
    17 GFF3367 Septum site-determining protein MinC no 0.55
    18 GFF4435 hypothetical protein no 0.55
    19 GFF2045 Peptide chain release factor 3 no 0.55
    20 GFF2109 FIG00454067: hypothetical protein no 0.54

    Or look for negative cofitness