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  • Top cofit genes for GFF543 from Variovorax sp. SCN45

    Uncharacterized deacetylase PA5390
    SEED: Acetylornithine deacetylase (EC 3.5.1.16)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6709 Putative hemagglutinin-related protein no 0.60
    2 GFF2003 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.60
    3 GFF4506 hypothetical protein no 0.59
    4 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.58
    5 GFF2529 ABC transporter, permease protein PA3837 no 0.56
    6 GFF1977 L-asparaginase (EC 3.5.1.1) no 0.56
    7 GFF4332 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.55
    8 GFF5299 TonB-dependent receptor no 0.53
    9 GFF707 probable integral membrane protein NMA1898 no 0.53
    10 GFF1909 FIG00537389: hypothetical protein no 0.53
    11 GFF6370 T6SS component Hcp no 0.53
    12 GFF1042 Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18) no 0.52
    13 GFF4195 BUG/TctC family periplasmic protein no 0.52
    14 GFF4705 Monooxygenase, flavin-binding family no 0.52
    15 GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    16 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) no 0.52
    17 GFF1668 BUG/TctC family periplasmic protein no 0.51
    18 GFF1869 no description no 0.51
    19 GFF2163 hypothetical protein no 0.51
    20 GFF86 Cell morphology protein no 0.51

    Or look for negative cofitness