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  • Top cofit genes for GFF5429 from Variovorax sp. SCN45

    Iron(III) dicitrate transport protein FecA
    SEED: Iron(III) dicitrate transport protein FecA
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.82
    2 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.82
    3 GFF2835 putative TonB-dependent receptor no 0.81
    4 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.78
    5 GFF6392 hypothetical protein 0.55 0.76
    6 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.76
    7 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase no 0.76
    8 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.28 0.75
    9 GFF2505 hypothetical protein no 0.74
    10 GFF531 hypothetical protein no 0.74
    11 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.71
    12 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.71
    13 GFF5035 Opine oxidase subunit A no 0.69
    14 GFF375 hypothetical protein 0.35 0.69
    15 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit no 0.66
    16 GFF5817 Two-component system sensor histidine kinase no 0.65
    17 GFF971 NLP/P60 protein no 0.64
    18 GFF2354 FIG00555615: hypothetical protein no 0.64
    19 GFF6686 Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins no 0.64
    20 GFF493 RND efflux system, inner membrane transporter 0.53 0.64

    Or look for negative cofitness